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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs77666565 chr6:26851415 G/A ZFP57 chr6:29640169-29648887:- 0.78 7.7 7.94E-14 Box Plot
THCA rs77673671 chr6:151760497 T/C NEK5 chr13:52607747-52703214:- 0.64 7.51 2.87E-13 Box Plot
THCA rs7767847 chr6:26597893 A/T ZNF322B chr9:99957633-99961910:- 0.73 15.43 7.35E-44 Box Plot
THCA rs77684601 chr12:94795357 C/G C6orf176 chr6:166337536-166401527:- -0.53 -5.93 5.75E-9 Box Plot
THCA rs77696054 chr3:125758853 T/TTG ROPN1 chr3:123687368-123711025:- -0.34 -6.06 2.83E-9 Box Plot
THCA rs7770769 chr6:116672360 T/C ECSIT chr19:11616731-11639989:- -0.25 -6.75 4.25E-11 Box Plot
THCA rs7771738 chr6:57197773 A/T GUSBL2 chr6:58246159-58287724:- -0.31 -5.94 5.35E-9 Box Plot
THCA rs7773620 chr6:158610911 C/T SGSM1 chr22:25202136-25323545:+ -0.25 -5.94 5.56E-9 Box Plot
THCA rs77747861 chr5:45972040 A/ACT LOC647121 chr1:121260910-121313686:+ 0.38 8.16 3.09E-15 Box Plot
THCA rs7775204 chr6:57256124 A/G GUSBL2 chr6:58246159-58287724:- -0.36 -6.67 7.18E-11 Box Plot
THCA rs7777404 chr7:140169399 T/C LOC441455 chr9:99488103-99489749:+ 0.48 6.39 3.92E-10 Box Plot
THCA rs7778958 chr7:33082518 T/C FKBP9L chr7:55748767-55780945:- 0.4 8.99 5.96E-18 Box Plot
THCA rs7778988 chr7:22020691 C/T FGG chr4:155525286-155534119:- 0.26 6.12 1.96E-9 Box Plot
THCA rs7779679 chr7:65481972 T/A ZNF117 chr7:64432154-64467062:- 0.27 6.23 1.02E-9 Box Plot
THCA rs77797625 chr5:46375239 A/C LOC647121 chr1:121260910-121313686:+ -0.36 -7.88 2.18E-14 Box Plot